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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955219.1_cds_XP_016493803.1_83873
CDS Infomation

[gene=LOC107813103] [db_xref=GeneID:107813103] [protein=probable xyloglucan glycosyltransferase 5] [protein_id=XP_016493803.1] [location=join(32072..32794,33395..33703,33824..34114,34528..34641,34869..35513)] [gbkey=CDS]
Sequence

ATGGCTCCAAGATTGAATTTTTTTGACTGGTGGGGTAAAGAAACACATAGGGGAACACCA
GTGATAGTGAAAATGGAGAACCCCAATTTCTCCATTGTTGAAATTGATGGTCCTGATTCA
GCATTTAAGCCAATAGAGAAGAGTAGAGGCAAGAATGCTAAACAAGTGACATGGGTTTTG
CTTCTTAAAGCTAATCAAGCTGTTGGCTTTGTTGCTTGGTTTGCAACAATTTTATGGACT
TTGTTTGGTACTATCAAGAATAGGCTTATTTTTAGAGAAGGGGTTTCTCTTGCAAGTGAG
AAACTTGGCAAAAGTAACCTACTTTTCAGAATAATCAAAGTTTGTTTGGTGATTTCTTTG
ATTATGTTGGCCTTTGAGATTGTTGCTTACTTCAAAGGTTGGGATTATTTTCAGAATCCA
AGTTTGTATATTCCACATACTTCTGATGTTTTGGGGTTGTTCCATATAACTTATGTTGGT
TGGTTGGATTTTCGTGCTGATTATATCGCGCCTTTTGTTCAAAATCTTTCCACATTCTGT
ACTGTTTTATTCCTAATTCAGTCGTTAGATCGTTTGGTACTTTGTTTGGGTTGCTTATAC
ATAAAGTGCATGAAGATTAAGCCAAGGATTGAAGGGGATCCGTTTAAATCGGATGATCTT
GAGGGATCATACAACAGCTACCCTATGGTTCTTGTGCAGATTCCAATGTGTAATGAAAAA
GAGGTATATGAGTTGTCTATATCGGCAGTCTGTCAACTTGATTGGCCAAAAGACCGTTTG
TTGATTCAAATTCTTGATGACTCTGACAATGAGTGCATCCAAGATTTAATAAAGTCAGAG
GTCGCTAAATGGAACCAAAAGGGTATCAACATAATTTATAGGCACCGTTTGGTTAGAACT
GGTTACAAAGCAGGGAACCTGAAGTCTGCGATGAGTTGTGACTATGTGAAGGATTATGAA
TTTGTTGCAATCTTTGATGCGGATTTCCAACCAACTCCAGATTTTCTTAAGCAGACAGTC
CCACATTTCAAGGATAACCCTGATCTAGGATTGGTTCAAACAAGATGGGCATTTGTTAAC
AAGGACGAAAACTTGTTGACTCGTCTCCAAAACATTAATCTGTGTTTTCATTTTGAGGTG
GAACAGCAGGTGAATGGCGTATTCTTGAACTTCTTTGGTTTCAACGGAACTGCCGGTATC
TGGAGAATAAAAGCCTTAGAAGAGTCAGGAGGTTGGCTTGAGAGGACAACCGTAGAGGAT
ATGGATATTGCTGTTCGTGCACATCTCAATGGCTGGAAATTCATATATCTTAATGACGTG
AGGGTACTTTGTGAAGTTCCTGAATCTTTTGAAGCATATAGGAAGCAACAACATCGGTGG
CATTCTGGCCCTATGCAACTCTTCCGAGTGTGTCTTCCTGCTATTGTTACTTCCAAGATA
TCAATATGGAAGAAAGCCAACTTAATACTTCTTTTCTTTTTGTTGAGAAAACTCATTCTT
CCCTTCTATTCATTCACATTGTTTTGTGTAGTTCTTCCTTTAACCATGTTTATCCCGGAA
GCGGAACTCCCTTTCTGGGTTGTTTGCTACATACCTATTCTTATGACACTTTTAAACATT
CTTCCGGCACCAAAAGCCATTCCTTTCATCGCCCCTTACCTCCTTTTCGAAAACACTATG
TCAGTCACAAAGTTCAATGCTATGGTATCCGGACTTTTCCAATTAGGAAGCTCATATGAG
TGGGTTGTCACCAAAAAAGCAGGTAGGTCTTCTGAATCCGACCTACTGGCCGCTGCTGAA
AAGGATTTAAAAGTGTCGGGAGCACCACAGATTAGCAGAGGGGCTTCTGAAAGTGAACTC
TCTGTGCTAAACCGATTGAACAAACAGAAAGATGAAACTTCTACACCTGTTAAGAAGAGC
AACAAAATATACAGAAAAGAGCTAGCTCTTGCTTTCTTACTCTTAACGGCGTCAGCTAGA
AGCCTTTTATCGGCTCACGGACTCCACTTTTACTTCCTTCTTTTCCAAGGAGTGACGTTC
CTTCTTGTTGGTCTCGATCTTATTGGCGAACAGATTAGCTAA

Peptide Sequence

PEP ID

XP_016493803.1
PEP Infomation

PREDICTED: probable xyloglucan glycosyltransferase 5 [Nicotiana tabacum]
Sequence

MAPRLNFFDWWGKETHRGTPVIVKMENPNFSIVEIDGPDSAFKPIEKSRGKNAKQVTWVL
LLKANQAVGFVAWFATILWTLFGTIKNRLIFREGVSLASEKLGKSNLLFRIIKVCLVISL
IMLAFEIVAYFKGWDYFQNPSLYIPHTSDVLGLFHITYVGWLDFRADYIAPFVQNLSTFC
TVLFLIQSLDRLVLCLGCLYIKCMKIKPRIEGDPFKSDDLEGSYNSYPMVLVQIPMCNEK
EVYELSISAVCQLDWPKDRLLIQILDDSDNECIQDLIKSEVAKWNQKGINIIYRHRLVRT
GYKAGNLKSAMSCDYVKDYEFVAIFDADFQPTPDFLKQTVPHFKDNPDLGLVQTRWAFVN
KDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGIWRIKALEESGGWLERTTVED
MDIAVRAHLNGWKFIYLNDVRVLCEVPESFEAYRKQQHRWHSGPMQLFRVCLPAIVTSKI
SIWKKANLILLFFLLRKLILPFYSFTLFCVVLPLTMFIPEAELPFWVVCYIPILMTLLNI
LPAPKAIPFIAPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLAAAE
KDLKVSGAPQISRGASESELSVLNRLNKQKDETSTPVKKSNKIYRKELALAFLLLTASAR
SLLSAHGLHFYFLLFQGVTFLLVGLDLIGEQIS

Transcript Sequence

Gene sequence data has not been registered.